pLVTHM allows for direct cloning of shRNAs into the lentiviral vectors and
replaces the old pLVTH system from Trono lab. pLVTHM is similar to pLVTH, but
contains a 3bp substitution that generates a unique MluI site for direct
cloning of an shRNA into MluI-ClaI. Please note that there is an additional
ClaI site in this vector that is blocked by Dam methylation . The plasmid needs
to be grown in a Dam+ bacterial strain in order to use ClaI for cloning. Note
that ClaI has lower salt concentration requirements than MluI. One way to handle
this is to digest with ClaI for 45 minutes, followed by addition of diluted
MluI buffer and MluI, then incubation for 90 more minutes. Be sure not to use a
large amount of vector (1.7 ug to 2.5 ug is known to work). Also, if your shRNA
is already in pSUPER (or another plasmid under the control of the PolIII
promoter) you may use the EcoRI-ClaI sites to replace the H1 promoter in pLVTHM
with the H1-shRNA cassette from pSUPER (or another plasmid).
